diff --git a/CI/deploy.sh b/CI/deploy.sh
index b03391d3781a85dc79cca3662651479366d16a37..c2308c0dd304a4233526953865acb1dd673ed22e 100755
--- a/CI/deploy.sh
+++ b/CI/deploy.sh
@@ -77,10 +77,19 @@ scp ref.sha otbpush@otb5-vm2.orfeo-toolbox.org:${jobs_directory}/
 #Untar doc
 if [ "$CI_COMMIT_REF_NAME" = "develop" ]
 then
+  #Cookbook
   ssh otbpush@otb5-vm2.orfeo-toolbox.org \
-  tar -xf ${jobs_directory}/CookBook-*-html.tar.gz -C ${jobs_directory}/
+    tar -xf ${jobs_directory}/CookBook-*-html.tar.gz -C ${jobs_directory}/
   ssh otbpush@otb5-vm2.orfeo-toolbox.org \
-  rm -rf /home/otbpush/test/CookBook/*
+    rm -rf /home/otbpush/test/CookBook/*
   ssh otbpush@otb5-vm2.orfeo-toolbox.org \
-  mv ${jobs_directory}/CookBook-*/* /home/otbpush/test/CookBook/.
+    mv ${jobs_directory}/CookBook-*/* /home/otbpush/test/CookBook/.
+
+  # Doxygen
+  ssh otbpush@otb5-vm2.orfeo-toolbox.org \
+    tar -xf ${jobs_directory}/OTB-Doxygen-*.tar.bz2 -C ${jobs_directory}/
+  ssh otbpush@otb5-vm2.orfeo-toolbox.org \
+    rm -rf /home/otbpush/test/Doxygen/*
+  ssh otbpush@otb5-vm2.orfeo-toolbox.org \
+    mv ${jobs_directory}/html/* /home/otbpush/test/Doxygen/
 fi
diff --git a/Documentation/Cookbook/rst/index.rst b/Documentation/Cookbook/rst/index.rst
index 86acf4e88184b219f736fb51732477acc14f4a3f..cd109ff5c5ee53e3efbe2a98c943756879a95827 100644
--- a/Documentation/Cookbook/rst/index.rst
+++ b/Documentation/Cookbook/rst/index.rst
@@ -1,7 +1,7 @@
 Welcome to Orfeo ToolBox!
 =========================
 
-`Orfeo ToolBox (OTB) <http://orfeo-toolbox.org>`_ is an open-source project for
+`Orfeo ToolBox (OTB) <https://www.orfeo-toolbox.org/>`_ is an open-source project for
 state-of-the-art remote sensing. Built on the shoulders of the open-source
 geospatial community, it can process high resolution optical, multispectral and
 radar images at the terabyte scale. A wide variety of applications are
@@ -32,7 +32,7 @@ joining `our community <https://www.orfeo-toolbox.org/community/>`_ and
 For other documentation, be sure to read:
 
 - OTB's website: `www.orfeo-toolbox.org <https://www.orfeo-toolbox.org/>`_
-- `Doxygen <http://orfeo-toolbox.org/doxygen/>`_, for exhaustive documentation
+- `Doxygen <https://www.orfeo-toolbox.org/doxygen/>`_, for exhaustive documentation
   of the C++ API.
 
 Table of Contents
diff --git a/Documentation/Cookbook/rst/recipes/pbclassif.rst b/Documentation/Cookbook/rst/recipes/pbclassif.rst
index 8a13d970b9ec03ff6d301b350060e1db8f166ab6..2524b6475a32c14030b43626c3eae91f3ea41115 100644
--- a/Documentation/Cookbook/rst/recipes/pbclassif.rst
+++ b/Documentation/Cookbook/rst/recipes/pbclassif.rst
@@ -475,7 +475,7 @@ to positive reference samples (either represented as a raster labeled
 image or as a vector data containing the reference classes). It will
 compute the confusion matrix and precision, recall and F-score of each
 class too, based on the
-`ConfusionMatrixCalculator <http://www.orfeo-toolbox.org/doxygen-current/classotb_1_1ConfusionMatrixCalculator.html>`_ 
+`ConfusionMatrixCalculator <https://www.orfeo-toolbox.org/doxygen/classotb_1_1ConfusionMatrixCalculator.html>`_ 
 class.
 
 If you have made an unsupervised classification, it must be specified