CMakeLists.txt

#--- EstimateImageStatistics ---#
# QB1 chain

OTB_TEST_APPLICATION(NAME apTvClComputeImagesStatisticsQB1
                     APP  ComputeImagesStatistics
                     OPTIONS -il ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -out ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clImageStatisticsQB1.xml
                             ${TEMP}/apTvClEstimateImageStatisticsQB1.xml)


OTB_TEST_APPLICATION(NAME apTvClTrainSVMImagesClassifierQB1
                     APP  TrainImagesClassifier
                     OPTIONS -io.il ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -io.vd ${INPUTDATA}/Classification/VectorData_QB1.shp
                             -io.imstat ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -classifier libsvm
                             -classifier.libsvm.opt true
                             -io.out ${TEMP}/clsvmModelQB1.svm
                             -rand 121212
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmModelQB1.svm
                             ${TEMP}/clsvmModelQB1.svm)

SET_TESTS_PROPERTIES(apTvClTrainSVMImagesClassifierQB1 PROPERTIES DEPENDS apTvClComputeImagesStatisticsQB1)


OTB_TEST_APPLICATION(NAME apTvClTrainSVMImagesClassifierQB1_allOpt
                     APP  TrainImagesClassifier
                     OPTIONS -io.il ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -io.vd ${INPUTDATA}/Classification/VectorData_QB1.shp
                             -io.imstat ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -classifier libsvm
                             -sample.mv 100
                             -sample.mt 100
                             -sample.vtr 0.5
                             -classifier.libsvm.opt true
                             -rand 121212
                             -io.out ${TEMP}/clsvmModelQB1_allOpt.svm
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmModelQB1.svm
                             ${TEMP}/clsvmModelQB1_allOpt.svm)
  
SET_TESTS_PROPERTIES(apTvClTrainSVMImagesClassifierQB1_allOpt PROPERTIES DEPENDS apTvClComputeImagesStatisticsQB1)


OTB_TEST_APPLICATION(NAME apTvClValidateSVMImagesClassifierQB1
                     APP  ValidateImagesClassifier
                     OPTIONS -il     ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -vd     ${INPUTDATA}/Classification/VectorData_QB1_bis.shp
                             -imstat ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -model  ${TEMP}/clsvmModelQB1.svm
                             -out    ${TEMP}/clsvmPerformanceEstimationQB1.txt
                             -rand   121212
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmPerformanceEstimationQB1.txt
                             ${TEMP}/clsvmPerformanceEstimationQB1.txt)
 
SET_TESTS_PROPERTIES(apTvClValidateSVMImagesClassifierQB1 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB1)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB1
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -model   ${TEMP}/clsvmModelQB1.svm
                             -out     ${TEMP}/clLabeledImageQB1.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB1.tif
                             ${TEMP}/clLabeledImageQB1.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB1 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB1)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB2
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_2_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -model   ${TEMP}/clsvmModelQB1.svm
                             -out     ${TEMP}/clLabeledImageQB2.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB2.tif
                             ${TEMP}/clLabeledImageQB2.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB2 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB1)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB3
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_3_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB1.xml
                             -model   ${TEMP}/clsvmModelQB1.svm
                             -out     ${TEMP}/clLabeledImageQB3.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB3.tif
                             ${TEMP}/clLabeledImageQB3.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB3 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB1)

#--------
# QB multi chain

OTB_TEST_APPLICATION(NAME apTvClComputeImagesStatisticsQB123
                     APP  ComputeImagesStatistics
                     OPTIONS -il ${INPUTDATA}/Classification/QB_1_ortho.tif
                                 ${INPUTDATA}/Classification/QB_2_ortho.tif
                                 ${INPUTDATA}/Classification/QB_3_ortho.tif
                             -out ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clImageStatisticsQB123.xml
                             ${TEMP}/apTvClEstimateImageStatisticsQB123.xml)


OTB_TEST_APPLICATION(NAME apTvClTrainSVMImagesClassifierQB123
                     APP  TrainImagesClassifier
                     OPTIONS -io.il ${INPUTDATA}/Classification/QB_1_ortho.tif
                                    ${INPUTDATA}/Classification/QB_2_ortho.tif
                                    ${INPUTDATA}/Classification/QB_3_ortho.tif
                             -io.vd ${INPUTDATA}/Classification/VectorData_QB1.shp
                                    ${INPUTDATA}/Classification/VectorData_QB2.shp
                                    ${INPUTDATA}/Classification/VectorData_QB3.shp
                             -io.imstat ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -classifier libsvm
                             -classifier.libsvm.opt true
                             -io.out ${TEMP}/clsvmModelQB123.svm
                             -rand 121212
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmModelQB123.svm
                             ${TEMP}/clsvmModelQB123.svm)

SET_TESTS_PROPERTIES(apTvClTrainSVMImagesClassifierQB123 PROPERTIES DEPENDS apTvClComputeImagesStatisticsQB123)


OTB_TEST_APPLICATION(NAME apTvClValidateSVMImagesClassifierQB123
                     APP  ValidateImagesClassifier
                     OPTIONS -il     ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -vd     ${INPUTDATA}/Classification/VectorData_QB1_bis.shp
                             -imstat ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -model  ${TEMP}/clsvmModelQB123.svm
                             -out    ${TEMP}/clsvmPerformanceEstimationQB123.txt
                             -rand   121212
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmPerformanceEstimationQB123.txt
                             ${TEMP}/clsvmPerformanceEstimationQB123.txt)
 
SET_TESTS_PROPERTIES(apTvClValidateSVMImagesClassifierQB123 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB123)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB123_1
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -model   ${TEMP}/clsvmModelQB123.svm
                             -out     ${TEMP}/clLabeledImageQB123_1.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                             ${TEMP}/clLabeledImageQB123_1.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB123_1 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB123)


OTB_TEST_APPLICATION(NAME apTvClLabeledImageColorMappingQB123_1
                     APP  ColorMapping
                     OPTIONS -in      ${TEMP}/clLabeledImageQB123_1.tif
                             -method  custom
                             -method.custom.lut ${INPUTDATA}/Classification/ColorTable.txt
                             -out     ${TEMP}/clLabeledFancyImageQB123_1.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledFancyImageQB123_1.tif
                             ${TEMP}/clLabeledFancyImageQB123_1.tif)

SET_TESTS_PROPERTIES(apTvClLabeledImageColorMappingQB123_1 PROPERTIES DEPENDS apTvClImageSVMClassifierQB123_1)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB123_2
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_2_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -model   ${TEMP}/clsvmModelQB123.svm
                             -out     ${TEMP}/clLabeledImageQB123_2.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB123_2.tif
                             ${TEMP}/clLabeledImageQB123_2.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB123_2 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB123)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB123_3
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_3_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -model   ${TEMP}/clsvmModelQB123.svm
                             -out     ${TEMP}/clLabeledImageQB123_3.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB123_3.tif
                             ${TEMP}/clLabeledImageQB123_3.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB123_3 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB123)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB123_6
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_6_extract.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB123.xml
                             -model   ${TEMP}/clsvmModelQB123.svm
                             -out     ${TEMP}/clLabeledImageQB123_6.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB123_6.tif
                             ${TEMP}/clLabeledImageQB123_6.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB123_6 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB123)


OTB_TEST_APPLICATION(NAME apTvClComputeImagesStatisticsQB456
                     APP  ComputeImagesStatistics
                     OPTIONS -il ${INPUTDATA}/Classification/QB_4_extract.tif
                                 ${INPUTDATA}/Classification/QB_5_extract.tif
                                 ${INPUTDATA}/Classification/QB_6_extract.tif
                             -out ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clImageStatisticsQB456.xml
                             ${TEMP}/apTvClEstimateImageStatisticsQB456.xml)


OTB_TEST_APPLICATION(NAME apTvClTrainSVMImagesClassifierQB456
                     APP  TrainImagesClassifier
                     OPTIONS -io.il ${INPUTDATA}/Classification/QB_4_extract.tif
                                    ${INPUTDATA}/Classification/QB_5_extract.tif
                                    ${INPUTDATA}/Classification/QB_6_extract.tif
                             -io.vd ${INPUTDATA}/Classification/VectorData_QB4.shp
                                    ${INPUTDATA}/Classification/VectorData_QB5.shp
                                    ${INPUTDATA}/Classification/VectorData_QB6.shp
                             -io.imstat ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -classifier libsvm
                             -classifier.libsvm.opt true
                             -io.out ${TEMP}/clsvmModelQB456.svm
                             -rand 121212
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmModelQB456.svm
                             ${TEMP}/clsvmModelQB456.svm)

SET_TESTS_PROPERTIES(apTvClTrainSVMImagesClassifierQB456 PROPERTIES DEPENDS apTvClComputeImagesStatisticsQB456)


OTB_TEST_APPLICATION(NAME apTvClValidateSVMImagesClassifierQB456
                     APP  ValidateImagesClassifier
                     OPTIONS -il     ${INPUTDATA}/Classification/QB_5_extract.tif
                             -vd     ${INPUTDATA}/Classification/VectorData_QB5_bis.shp
                             -imstat ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -model  ${TEMP}/clsvmModelQB456.svm
                             -rand   121212
                             -out    ${TEMP}/clsvmPerformanceEstimationQB456.txt
                     VALID   --compare-ascii ${NOTOL}
                             ${OTBAPP_BASELINE_FILES}/clsvmPerformanceEstimationQB456.txt
                             ${TEMP}/clsvmPerformanceEstimationQB456.txt)

SET_TESTS_PROPERTIES(apTvClValidateSVMImagesClassifierQB456 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB456)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB456_4
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_4_extract.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -model   ${TEMP}/clsvmModelQB456.svm
                             -out     ${TEMP}/clLabeledImageQB456_4.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB456_4.tif
                             ${TEMP}/clLabeledImageQB456_4.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB456_4 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB456)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB456_5
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_5_extract.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -model   ${TEMP}/clsvmModelQB456.svm
                             -out     ${TEMP}/clLabeledImageQB456_5.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB456_5.tif
                             ${TEMP}/clLabeledImageQB456_5.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB456_5 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB456)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB456_6
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_6_extract.tif
                             -mask    ${INPUTDATA}/Classification/QB_6_mask.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -model   ${TEMP}/clsvmModelQB456.svm
                             -out     ${TEMP}/clLabeledImageQB456_6.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB456_6.tif
                             ${TEMP}/clLabeledImageQB456_6.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB456_6 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB456)


OTB_TEST_APPLICATION(NAME apTvClImageSVMClassifierQB456_1
                     APP  ImageClassifier
                     OPTIONS -in      ${INPUTDATA}/Classification/QB_1_ortho.tif
                             -imstat  ${TEMP}/apTvClEstimateImageStatisticsQB456.xml
                             -model   ${TEMP}/clsvmModelQB456.svm
                             -out     ${TEMP}/clLabeledImageQB456_1.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB456_1.tif
                             ${TEMP}/clLabeledImageQB456_1.tif)

SET_TESTS_PROPERTIES(apTvClImageSVMClassifierQB456_1 PROPERTIES DEPENDS apTvClTrainSVMImagesClassifierQB456)


OTB_TEST_APPLICATION(NAME apTvClKMeansImageClassification
                     APP  KMeansClassification
                     OPTIONS -in ${INPUTDATA}/qb_RoadExtract.img
                             -vm ${INPUTDATA}/qb_RoadExtract_mask.png
                             -ts 30000
                             -nc 5
                             -maxit 10000
                             -ct 0.0000001
                             -rand 121212
                             -out ${TEMP}/apTvClKMeansImageClassificationFilterOuptut.tif
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/apTvClKMeansImageClassificationFilterOuptut.tif
                             ${TEMP}/apTvClKMeansImageClassificationFilterOuptut.tif )


# --- SOMClassification ---
OTB_TEST_APPLICATION(NAME apTvClSOMClassificationSmall
                     APP  SOMClassification
                     OPTIONS -in ${INPUTDATA}/poupees_sub.png
                             -rand 121212
                             -out ${TEMP}/apTvClSOMClassificationSmall.tif uint16
                     VALID   --compare-image ${NOTOL}
                             ${BASELINE}/apTvClSOMClassificationSmall.tif
                             ${TEMP}/apTvClSOMClassificationSmall.tif)


OTB_TEST_APPLICATION(NAME apTvClSOMClassificationFull
                     APP  SOMClassification
                     OPTIONS -in  ${INPUTDATA}/poupees_sub.png
                             -out ${TEMP}/apTvClSOMClassificationFull.tif uint16
                             -vm  ${INPUTDATA}/poupees_sub_c1.png
                             -tp  0.8
                             -ts  13000
                             -sl  32
                             -som ${TEMP}/apTvClSOMClassificationMap.hdr
                             -sx  30
                             -sy  30
                             -nx  9
                             -ny  9
                             -ni  5
                             -bi  1.0
                             -bf  0.1
                             -iv  0
                             -rand 121212
                     VALID   --compare-n-images ${NOTOL} 2
                             ${BASELINE}/apTvClSOMClassificationFull.tif
                             ${TEMP}/apTvClSOMClassificationFull.tif
                             ${BASELINE}/apTvClSOMClassificationMap.hdr
                             ${TEMP}/apTvClSOMClassificationMap.hdr)


# --- Fusion of classifications ---
OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsMV2Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                                 ${OTBAPP_BASELINE}/clLabeledImageQB456_1.tif
                             -method majorityvoting
                             -undecidedlabel 100
                             -out ${TEMP}/apTvFusionOfClassificationsMV2InputsOutput.tif uint16
                     VALID   --compare-image ${NOTOL}
                     ${OTBAPP_BASELINE}/apTvFusionOfClassifications2InputsOutput.tif
                     ${TEMP}/apTvFusionOfClassificationsMV2InputsOutput.tif)


OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsMV3Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                                 ${OTBAPP_BASELINE}/clLabeledImageQB456_1.tif
                                 ${OTBAPP_BASELINE}/clLabeledImageQB1.tif
                             -method majorityvoting
                             -undecidedlabel 100
                             -out ${TEMP}/apTvFusionOfClassificationsMV3InputsOutput.tif uint16
                     VALID   --compare-image ${NOTOL}
                     ${OTBAPP_BASELINE}/apTvFusionOfClassifications3InputsOutput.tif
                     ${TEMP}/apTvFusionOfClassificationsMV3InputsOutput.tif)


OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsDSPrecision6Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il  ${INPUTDATA}/Classification/QB_1_ortho_C1.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C2.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C3.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C4.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C5.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C6.tif
                             -method dempstershafer
                             -method.dempstershafer.cmfl ${INPUTDATA}/Classification/QB_1_ortho_C1.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C2.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C3.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C4.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C5.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C6.csv
                             -method.dempstershafer.mob precision
                             -nodatalabel 10
                             -undecidedlabel 7
                             -out ${TEMP}/apTvFusionOfClassificationsDS6InputsPrecisionOutput.tif uint8
                     VALID   --compare-image ${NOTOL}
                     ${BASELINE}/QB_1_ortho_DS_FUSED_PRECISION.tif
                     ${TEMP}/apTvFusionOfClassificationsDS6InputsPrecisionOutput.tif)


OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsDSRecall6Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il  ${INPUTDATA}/Classification/QB_1_ortho_C1.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C2.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C3.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C4.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C5.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C6.tif
                             -method dempstershafer
                             -method.dempstershafer.cmfl ${INPUTDATA}/Classification/QB_1_ortho_C1.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C2.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C3.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C4.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C5.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C6.csv
                             -method.dempstershafer.mob recall
                             -nodatalabel 10
                             -undecidedlabel 7
                             -out ${TEMP}/apTvFusionOfClassificationsDS6InputsRecallOutput.tif uint8
                     VALID   --compare-image ${NOTOL}
                     ${BASELINE}/QB_1_ortho_DS_FUSED_RECALL.tif
                     ${TEMP}/apTvFusionOfClassificationsDS6InputsRecallOutput.tif)


OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsDSAccuracy6Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il  ${INPUTDATA}/Classification/QB_1_ortho_C1.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C2.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C3.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C4.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C5.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C6.tif
                             -method dempstershafer
                             -method.dempstershafer.cmfl ${INPUTDATA}/Classification/QB_1_ortho_C1.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C2.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C3.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C4.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C5.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C6.csv
                             -method.dempstershafer.mob accuracy
                             -nodatalabel 10
                             -undecidedlabel 7
                             -out ${TEMP}/apTvFusionOfClassificationsDS6InputsAccuracyOutput.tif uint8
                     VALID   --compare-image ${NOTOL}
                     ${BASELINE}/QB_1_ortho_DS_FUSED_ACCURACY.tif
                     ${TEMP}/apTvFusionOfClassificationsDS6InputsAccuracyOutput.tif)


OTB_TEST_APPLICATION(NAME apTvFusionOfClassificationsDSKappa6Inputs
                     APP  FusionOfClassifications
                     OPTIONS -il  ${INPUTDATA}/Classification/QB_1_ortho_C1.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C2.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C3.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C4.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C5.tif
                                  ${INPUTDATA}/Classification/QB_1_ortho_C6.tif
                             -method dempstershafer
                             -method.dempstershafer.cmfl ${INPUTDATA}/Classification/QB_1_ortho_C1.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C2.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C3.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C4.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C5.csv
                                                         ${INPUTDATA}/Classification/QB_1_ortho_C6.csv
                             -method.dempstershafer.mob kappa
                             -nodatalabel 10
                             -undecidedlabel 7
                             -out ${TEMP}/apTvFusionOfClassificationsDS6InputsKappaOutput.tif uint8
                     VALID   --compare-image ${NOTOL}
                     ${BASELINE}/QB_1_ortho_DS_FUSED_KAPPA.tif
                     ${TEMP}/apTvFusionOfClassificationsDS6InputsKappaOutput.tif)


# --- Compute confusion matrix ---
OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixV
                     APP  ComputeConfusionMatrix
                     OPTIONS -in ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                             -ref vector
                             -ref.vector.in ${INPUTDATA}/Classification/VectorData_QB1_ter.shp
                             -ref.vector.field Class
                             -out ${TEMP}/apTvComputeConfusionMatrixTconfusionVOut.csv
                     VALID   --compare-ascii ${NOTOL}
                     ${OTBAPP_BASELINE_FILES}/apTvComputeConfusionMatrixTconfusionVOut.csv
                     ${TEMP}/apTvComputeConfusionMatrixTconfusionVOut.csv)


OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixR
                     APP  ComputeConfusionMatrix
                     OPTIONS -in ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                             -ref raster
                             -ref.raster.in ${INPUTDATA}/Classification/clLabeledImageQB456_1_NoData_255.tif
                             -nodatalabel 255
                             -out ${TEMP}/apTvComputeConfusionMatrixTconfusionROut.csv
                     VALID   --compare-ascii ${NOTOL}
                     ${OTBAPP_BASELINE_FILES}/apTvComputeConfusionMatrixTconfusionROut.csv
                     ${TEMP}/apTvComputeConfusionMatrixTconfusionROut.csv)


OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixExtraReferenceLabelsV
                     APP  ComputeConfusionMatrix
                     OPTIONS -in ${INPUTDATA}/Classification/QB_1_ortho_C7.tif
                             -ref vector
                             -ref.vector.in ${INPUTDATA}/Classification/VectorData_QB1_ter.shp
                             -ref.vector.field Class
                             -out ${TEMP}/apTvComputeConfusionMatrixExtraRefLabelsVOut.csv
                     VALID   --compare-ascii ${NOTOL}
                     ${OTBAPP_BASELINE_FILES}/apTvComputeConfusionMatrixExtraRefLabelsVOut.csv
                     ${TEMP}/apTvComputeConfusionMatrixExtraRefLabelsVOut.csv)


OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixExtraReferenceLabelsR
                     APP  ComputeConfusionMatrix
                     OPTIONS -in ${INPUTDATA}/Classification/QB_1_ortho_C7.tif
                             -ref raster
                             -ref.raster.in ${INPUTDATA}/Classification/clLabeledImageQB456_1_NoData_255.tif
                             -nodatalabel 255
                             -out ${TEMP}/apTvComputeConfusionMatrixExtraRefLabelsROut.csv
                     VALID   --compare-ascii ${NOTOL}
                     ${OTBAPP_BASELINE_FILES}/apTvComputeConfusionMatrixExtraRefLabelsROut.csv
                     ${TEMP}/apTvComputeConfusionMatrixExtraRefLabelsROut.csv)


OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixExtraProducedLabelsR
                     APP  ComputeConfusionMatrix
                     OPTIONS -in ${INPUTDATA}/Classification/clLabeledImageQB456_1_NoData_255.tif
                             -ref raster
                             -ref.raster.in ${INPUTDATA}/Classification/QB_1_ortho_C8.tif
                             -nodatalabel 255
                             -out ${TEMP}/apTvComputeConfusionMatrixExtraProdLabelsROut.csv
                     VALID   --compare-ascii ${NOTOL}
                     ${OTBAPP_BASELINE_FILES}/apTvComputeConfusionMatrixExtraProdLabelsROut.csv
                     ${TEMP}/apTvComputeConfusionMatrixExtraProdLabelsROut.csv)


#OTB_TEST_APPLICATION(NAME apTvComputeConfusionMatrixI
#                     APP  ComputeConfusionMatrix
#                     OPTIONS -in ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
#                             -ref raster
#                             -ref.raster.in ${OTBAPP_BASELINE}/clLabeledImageQB456_1.tif
#                             -labels 4
#                             -nodata 255
#                             -out ${TEMP}/apTvComputeConfusionMatrixTconfusionROut.txt
#                     VALID   --compare-ascii ${NOTOL}
#                     ${OTBAPP_BASELINE}/apTvComputeConfusionMatrixTconfusionROut.txt
#                     ${TEMP}/apTvComputeConfusionMatrixTconfusionROut.txt)


OTB_TEST_APPLICATION(NAME apTvClassificationMapRegularization
                     APP  ClassificationMapRegularization
                     OPTIONS -io.in  ${OTBAPP_BASELINE}/clLabeledImageQB123_1.tif
                             -io.out ${TEMP}/clLabeledImageQB123_1_CMR_r2_nodl_10_undl_7.tif
                             -ip.radius 2
                             -ip.suvbool true
                             -ip.nodatalabel 10
                             -ip.undecidedlabel 7
                     VALID   --compare-image ${NOTOL}
                             ${OTBAPP_BASELINE}/clLabeledImageQB123_1_CMR_r2_nodl_10_undl_7.tif
                             ${TEMP}/clLabeledImageQB123_1_CMR_r2_nodl_10_undl_7.tif)