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Commit 11459e7c authored by Jordi Inglada's avatar Jordi Inglada
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Exemple streaming

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Examples/IO/CMakeLists.txt
+ 4
− 0
View file @ 11459e7c
......@@ -3,6 +3,10 @@ PROJECT(IOExamples)
ADD_EXECUTABLE(ImageReadWrite ImageReadWrite.cxx )
TARGET_LINK_LIBRARIES(ImageReadWrite OTBCommon OTBIO ITKCommon ITKIO)
ADD_EXECUTABLE(StreamingImageReadWrite StreamingImageReadWrite.cxx )
TARGET_LINK_LIBRARIES(StreamingImageReadWrite OTBCommon OTBIO ITKCommon ITKIO)
ADD_EXECUTABLE(ImageReadCastWrite ImageReadCastWrite.cxx )
TARGET_LINK_LIBRARIES(ImageReadCastWrite OTBCommon OTBIO ITKCommon ITKIO)
......
Examples/IO/StreamingImageReadWrite.cxx 0 → 100644
+ 167
− 0
View file @ 11459e7c
/*=========================================================================
=========================================================================*/
#if defined(_MSC_VER)
#pragma warning ( disable : 4786 )
#endif
#ifdef __BORLANDC__
#define ITK_LEAN_AND_MEAN
#endif
// Software Guide : BeginLatex
//
// As we have seen, the reading of images is managed by the class \doxygen{otb::ImageFileReader}
// while writing is performed by the class
// \doxygen{otb::ImageFileWriter}. ITK's pipeline implements
// streaming. That means that a filter for which the
// \code{ThreadedGenerateData} method is implemented, will only produce the
// data for the region requested by the following filter in the
// pipeline. Therefore, in order to use the streaming functionnality
// one needs to use a filter at the end of the pipeline which
// requests for adjacent regions of the image to be processed. In
// ITK, the \doxygen{itk::StreamingImageFilter} class is used for
// this purpose. However, ITK does not implement streaming from/to
// files. This means that even if the pipeline has a small memory
// footprint, the images have to be stored in memory at least after
// the read operation and before the write operation.
//
// OTB implements read/write streaming. For the image file reading,
// this is transparent for the programmer, and if a streaming loop is
// used at the end of the pipeline, the read operation will be
// streamed. For the file writing, the
// \doxygen{otb::StreamingImageFileWriter} has to be used.
//
// The first step for performing streamed reading and writing is to include the
// following headers.
//
// \index{otb::ImageFileReader|textbf}
// \index{otb::ImageFileReader!header}
//
// \index{otb::StreamingImageFileWriter|textbf}
// \index{otb::StreamingImageFileWriter!header}
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
#include "otbImageFileReader.h"
#include "otbStreamingImageFileWriter.h"
// Software Guide : EndCodeSnippet
#include "otbImage.h"
int main( int argc, char ** argv )
{
// Verify the number of parameters in the command line
if( argc < 3 )
{
std::cerr << "Usage: " << std::endl;
std::cerr << argv[0] << " inputImageFile outputImageFile " << std::endl;
return EXIT_FAILURE;
}
// Software Guide : BeginLatex
//
// Then, as usual, a decision must be made about the type of pixel used to
// represent the image processed by the pipeline.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
typedef unsigned short PixelType;
const unsigned int Dimension = 2;
typedef otb::Image< PixelType, Dimension > ImageType;
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// We can now instantiate the types of the reader and writer. These two
// classes are parameterized over the image type.
//
// \index{otb::StreamingImageFileWriter!Instantiation}
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
typedef otb::ImageFileReader< ImageType > ReaderType;
typedef otb::StreamingImageFileWriter< ImageType > WriterType;
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// Then, we create one object of each type using the New() method and
// assigning the result to a \doxygen{SmartPointer}.
//
// \index{otb::ImageFileReader!New()}
// \index{otb::ImageFileWriter!New()}
// \index{otb::StreamingImageFileReader!SmartPointer}
// \index{otb::ImageFileWriter!SmartPointer}
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
ReaderType::Pointer reader = ReaderType::New();
WriterType::Pointer writer = WriterType::New();
// Software Guide : EndCodeSnippet
// Here we recover the file names from the command line arguments
//
const char * inputFilename = argv[1];
const char * outputFilename = argv[2];
// Software Guide : BeginLatex
//
// The name of the file to be read or written is passed with the
// SetFileName() method.
//
// \index{otb::ImageFileReader!SetFileName()}
// \index{otb::StreamingImageFileWriter!SetFileName()}
// \index{SetFileName()!otb::ImageFileReader}
// \index{SetFileName()!otb::StreamingImageFileWriter}
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
reader->SetFileName( inputFilename );
writer->SetFileName( outputFilename );
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// We can now connect these readers and writers to filters to create a
// pipeline. For example, we can create a short pipeline by passing
// the output of the reader directly to the input of the writer.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
writer->SetInput( reader->GetOutput() );
// Software Guide : EndCodeSnippet
try
{
writer->Update();
}
catch( itk::ExceptionObject & err )
{
std::cerr << "ExceptionObject caught !" << std::endl;
std::cerr << err << std::endl;
return EXIT_FAILURE;
}
return EXIT_SUCCESS;
}
Utilities/ITK/Utilities/nifti/Makefile
+ 32
− 32
View file @ 11459e7c
......@@ -17,10 +17,10 @@ RM = /usr/local/bin/cmake -E remove -f
CMAKE_EDIT_COMMAND = /usr/local/bin/ccmake
# The top-level source directory on which CMake was run.
CMAKE_SOURCE_DIR = /home1/romain/ORFEO-TOOLBOX/otb/OTB
CMAKE_SOURCE_DIR = /usr/local/stok/OTB/trunk/OTB
# The top-level build directory on which CMake was run.
CMAKE_BINARY_DIR = /home1/romain/ORFEO-TOOLBOX/otb/OTB
CMAKE_BINARY_DIR = /usr/local/stok/OTB/trunk/OTB
#=============================================================================
# Special targets provided by cmake.
......@@ -57,11 +57,11 @@ $(VERBOSE).SILENT:
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all:
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# The main clean target
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......
Utilities/ITK/Utilities/nifti/niftilib/Makefile
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View file @ 11459e7c
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Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/rule:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/rule
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/rule
# Convenience name for target.
ITKniftiio: Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/rule
# target for object file
nifti1_io.o:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/build.make Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/nifti1_io.o
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/build.make Utilities/ITK/Utilities/nifti/niftilib/CMakeFiles/ITKniftiio.dir/nifti1_io.o
# Help Target
help::
......
Utilities/ITK/Utilities/nifti/znzlib/Makefile
+ 6
− 6
View file @ 11459e7c
......@@ -17,10 +17,10 @@ RM = /usr/local/bin/cmake -E remove -f
CMAKE_EDIT_COMMAND = /usr/local/bin/ccmake
# The top-level source directory on which CMake was run.
CMAKE_SOURCE_DIR = /home1/romain/ORFEO-TOOLBOX/otb/OTB
CMAKE_SOURCE_DIR = /usr/local/stok/OTB/trunk/OTB
# The top-level build directory on which CMake was run.
CMAKE_BINARY_DIR = /home1/romain/ORFEO-TOOLBOX/otb/OTB
CMAKE_BINARY_DIR = /usr/local/stok/OTB/trunk/OTB
#=============================================================================
# Special targets provided by cmake.
......@@ -57,11 +57,11 @@ $(VERBOSE).SILENT:
# The main all target
all:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/directorystart
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/directorystart
# The main clean target
clean:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/clean
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/clean
# clear depends
depend:
......@@ -69,14 +69,14 @@ depend:
# Convenience name for target.
Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/rule:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/rule
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f CMakeFiles/Makefile2 Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/rule
# Convenience name for target.
ITKznz: Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/rule
# target for object file
znzlib.o:
cd /home1/romain/ORFEO-TOOLBOX/otb/OTB && $(MAKE) -f Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/build.make Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/znzlib.o
cd /usr/local/stok/OTB/trunk/OTB && $(MAKE) -f Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/build.make Utilities/ITK/Utilities/nifti/znzlib/CMakeFiles/ITKznz.dir/znzlib.o
# Help Target
help::
......
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