ENH: Apply patches necessary after modularization

Modules/Adapters/CurlAdapters/include/otbCurlHelper.h

@@ -30,6 +30,8 @@ namespace otb
  * not available, i.e. the compilation should pass, the runtime should
  * not segfault but of course, the behavior will be different.
  *
+ *
+ * \ingroup OTBCurlAdapters
  */
 class ITK_EXPORT CurlHelper : public CurlHelperInterface
 {

Modules/Adapters/CurlAdapters/include/otbCurlHelperInterface.h

@@ -32,6 +32,8 @@ namespace otb
  * This class implement the interface of the curl access allowing for
  * different implementation to be used (include stubs for test).
  *
+ *
+ * \ingroup OTBCurlAdapters
  */
 class ITK_EXPORT CurlHelperInterface : public itk::Object
 {

Modules/Adapters/CurlAdapters/include/otbCurlHelperStub.h

@@ -28,6 +28,8 @@ namespace otb
  *
  * This class is available only for testing purposes
  *
+ *
+ * \ingroup OTBCurlAdapters
  */
 class ITK_ABI_EXPORT CurlHelperStub : public CurlHelperInterface
 {

Modules/Adapters/GdalAdapters/include/otbGeometriesSet.h

@@ -29,6 +29,8 @@ namespace otb
  * \class GeometriesSet
  * \brief Common ITK type to manipulate any set of geometries: a \c otb::ogr::DataSource, or a \c otb::ogr::Layer.
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class ITK_EXPORT GeometriesSet : public itk::DataObject
   {

Modules/Adapters/GdalAdapters/include/otbGeometriesSource.h

@@ -59,6 +59,8 @@ namespace otb
  * ogr::DataSource can't be grafted, and as a consequence, \c GeometriesSource
  * subtypes can't be grafted as well.
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class ITK_EXPORT GeometriesSource : public itk::ProcessObject, boost::noncopyable
   {

Modules/Adapters/GdalAdapters/include/otbGeometriesToGeometriesFilter.h

@@ -43,6 +43,8 @@ namespace otb
  * \class GeometriesToGeometriesFilter
  * Root abstract class for all geometries to geometries filters.
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class ITK_EXPORT GeometriesToGeometriesFilter : public GeometriesSource
   {
@@ -239,6 +241,8 @@ private:
  * actual \c TransformationFunctor.
  * \since OTB v 3.14.0
  * \todo Add a specialization for \c ogr::Feature.
+ *
+ * \ingroup OTBGdalAdapters
  */
 template <class TransformationFunctor, class TransformedElementType, class FieldTransformationPolicy = FieldCopyTransformation>
 struct TransformationFunctorDispatcher
@@ -317,6 +321,8 @@ private:
  * what we need).
  * \since OTB v 3.14.0
  * \todo Find a better name
+ *
+ * \ingroup OTBGdalAdapters
  */
 template <class TransformationFunctor, class FieldTransformationPolicy = FieldCopyTransformation>
 class ITK_EXPORT DefaultGeometriesToGeometriesFilter

Modules/Adapters/GdalAdapters/include/otbImageReference.h

@@ -30,6 +30,8 @@ namespace ogr
  * \todo See how mix it with the \c otb::ogr::DataSource wrapper as it was
  * with \c VectorData.
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 template <typename TPrecision> class ImageReference
 {

Modules/Adapters/GdalAdapters/include/otbOGRDataSourceWrapper.h

@@ -59,6 +59,8 @@ namespace otb { namespace ogr {
  * - all functions related to the reference count.
  * \since OTB v 3.14.0
  * \internal As the class is not meant to be inherited, no new function is virtual.
+ *
+ * \ingroup OTBGdalAdapters
  */
 class DataSource : public itk::DataObject , public boost::noncopyable
   {
@@ -176,6 +178,8 @@ public:
    * instance.
    * \see http://www.boost.org/doc/libs/1_49_0/libs/iterator/doc/iterator_facade.html#tutorial-example
    * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
    */
   template <class Value> class layer_iter
     : public boost::iterator_facade<layer_iter<Value>, Value, boost::random_access_traversal_tag, Value>

Modules/Adapters/GdalAdapters/include/otbOGRFeatureWrapper.h

@@ -51,6 +51,8 @@ bool operator==(Feature const& lhs, Feature const& rhs);
  * se, as it may be null in some cases, for instance to define mark the \c
  * Layer::end() iterator.
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class Feature
   {

Modules/Adapters/GdalAdapters/include/otbOGRFieldWrapper.h

@@ -39,6 +39,8 @@ namespace otb { namespace ogr {
  * \c OGRFeatureDefn.
  * \sa OGRFieldDefn
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class FieldDefn
   {
@@ -87,6 +89,8 @@ class Feature;
  * \invariant <tt>m_Feature->GetFieldDefnRef(m_index) != 0</tt>.
  * \sa OGRField
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class Field
 {

Modules/Adapters/GdalAdapters/include/otbOGRHelpers.h

@@ -51,6 +51,8 @@ namespace ogr
  * order to ensure the temporary vector of <tt>char*</tt> survives the call of
  * \c to_ogr(). Even when used as suggested by the example above, the vector
  * survives till the <tt>; </tt> at the end of the instruction.
+ *
+ * \ingroup OTBGdalAdapters
  */
 struct StringListConverter
 {

Modules/Adapters/GdalAdapters/include/otbOGRLayerWrapper.h

@@ -60,6 +60,8 @@ bool operator==(Layer const& lhs, Layer const& rhs);
  *
  * \todo Find a way to be notified when the related \c OGRDataSource is released
  * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
  */
 class Layer
   {
@@ -312,6 +314,8 @@ public:
    * instance.
    * \see http://www.boost.org/doc/libs/1_49_0/libs/iterator/doc/iterator_facade.html#tutorial-example
    * \since OTB v 3.14.0
+ *
+ * \ingroup OTBGdalAdapters
    */
   template <class Value> class feature_iter
     : public boost::iterator_facade<feature_iter<Value>, Value, boost::single_pass_traversal_tag>

Modules/Adapters/ITKPendingPatches/include/itkFFTComplexToComplexImageFilter.h

@@ -46,6 +46,8 @@ namespace itk
  *
  * \sa ForwardFFTImageFilter
  * \ingroup ITKReview
+ *
+ * \ingroup OTBITKPendingPatches
  */
 template< class TImage >
 class FFTComplexToComplexImageFilter:

Modules/Adapters/ITKPendingPatches/include/itkFFTWComplexToComplexImageFilter.h

@@ -51,6 +51,8 @@ namespace itk
  * \ingroup ITKReview
  *
  * \sa FFTWGlobalConfiguration
+ *
+ * \ingroup OTBITKPendingPatches
  */
 template< class TImage >
 class ITK_EXPORT FFTWComplexToComplexImageFilter:

Modules/Adapters/ITKPendingPatches/include/itkImageRegionMultidimensionalSplitter.h

@@ -55,6 +55,8 @@ namespace itk
  * implements the same algorithm.
  *
  * \ingroup ITKDeprecated
+ *
+ * \ingroup OTBITKPendingPatches
  */
 
 template< unsigned int VImageDimension >

Modules/Adapters/ITKPendingPatches/include/itkImageRegionSplitter.h

@@ -63,6 +63,8 @@ namespace itk
 
  *
  * \ingroup ITKDeprecated
+ *
+ * \ingroup OTBITKPendingPatches
  */
 
 template< unsigned int VImageDimension >

Modules/Adapters/ITKPendingPatches/include/itkTransformToDisplacementFieldSource.h

@@ -50,6 +50,8 @@ namespace itk
  *
  * \ingroup GeometricTransform
  * \ingroup ITKReview
+ *
+ * \ingroup OTBITKPendingPatches
  */
 template< class TOutputImage,