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WRG: fix warnings declaration shadows a previous local seen with gcc 8

Manuel Grizonnet requested to merge warnings_shadow_declaration into develop

Fix most of the 39 warnings on pc-christophe (gcc 8):

https://dash.orfeo-toolbox.org/viewBuildError.php?type=1&buildid=332827

I've tagged the MR as 'patch' but also register the branch to the test queue to check if I did not forget any fixable warnings.

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